My CURRICULUM VITAE


Personal Informations


Name : Mourad Elloumi
Gender : Male.
Date and Place of Birth : April 20, 1962 in Tunis.
Nationality : Tunisian.
Profession : Associate-Professor in Computer Science,
                     Computer Science Department,
                     Faculty of Economic Sciences and Management of Tunis, Tunisia.
E.mail  :
BIG     :
URL    :







Education

  2003
      Habilitation Degree in Computer Science at the University of Manouba, Tunis, Tunisia.

  1994
      Ph.D. Degree in Computer Science at the University of Aix-Marseilles III, France.

  1989
      Master Degree in Computer Science at the University of Aix-Marseilles III, France.

  1988
      Master Degree in Computer Engineering at the University of Tunis-El Manar, Tunisia.

  1984
      Higher Studies in Maths. and Physics Degree at the University of Tunis-El Manar, Tunisia.

  1981
      School Leaving Certificate in Mathematics and Sciences, Alaoui School, Tunis, Tunisia.






Training Periods and Stays

From April 15 to April 28 2007 :
   Location : Dept. Maths and Informatics, University of Udine, Udine, Italy.
  Subjects : Algorithms for Aligning Proteins Contact Maps,
                    Algorithms for finding Motifs in DNA Sequences.

From December 3 to December 17 1998 :
   Location : Gaspard Monge Institute, University of Marne-la-Vallée, Paris, France.
   Subject : Algorithms  for DNA Sequence Assembly

From October 1989 to September 1995 :
   Location : National Centre of Scientific Research, Marseilles, France.
   Subject : Algorithms for Biological Sequences Analysis
   Environment : Pascal/C on SUN under UNIX and on VAX 6310 under VMS

From October 1988 to June 1989 :
   Location : National Centre of Scientific Research, Marseilles, France.
   Subject : Structural Description of a String and Generalization of a Set of Strings
   Environment : Pascal on Macintosh

From January 1988 to June 1988 :
   Location : Faculty of Sciences of Tunis, Tunisia.
   Subject : Experimentation of the Hybrid Method on Industrial Applications :
                Programs Recovering
   Environment : Turbo Pascal on IBM/PC

From January 1987 to June 1987 :
   Location : Faculty of Sciences of Tunis, Tunisia.
   Subject : Control of Aptitude of Reasoning.
   Environment : Pascal on Mini 6 (BULL)

From October 1986 to December 1986 :
   Location : National Centre of Informatics, Tunis, Tunisia.
   Subject : Assessment of  DPS8 Computer Performances
   Environment : DPS8 (BULL)







Seminars

Octobre 2000 :
  Title : DNA Sequence Assembly Algorithms based on Clustering Approachs
   Location : Higher Polytechnic School, University of Antananarivo
                     (Antananarivo, Madagascar)

Octobre 1998 :
   Title : Algorithms for the Prediction of RNA Secondary Structures
   Location : Higher Polytechnic School, Cheikh Anta Diop University (Dakar, Senegal)

November 1993 :
   Title : Analysis of Strings Coding Biological Macromolecules
   Location : Gaspard Monge Institute, University of Marne-la-Vallée (Paris, France).

April 1991 :
   Title: Strings Comparison
   Location : Knowledge Representation and Processing Group,
                     National Centre of Scientific Research (Marseilles, France).







Advanced Trainings

From 8 to 9 October 1998 :
   Title : Software Security
   Location : Higher Polytechnic School, Cheikh Anta Diop University (Dakar, Senegal)

10 October 1998 :
   Title : Modelling and Software Engineering
   Location : Higher Polytechnic School, Cheikh Anta Diop University (Dakar, Senegal)






Supervisions

From July 2006 to Present :
  Student (s) : Ahmed Mokaddem
  Level : Master in Computer Science,
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : Algorithms for Comparison of Biological Sequences

From September 2005 to Present :
  Student(s) : Hatem Tahri
  Level : Ph.D. in Computer Science,
  Location : National School of Computer Science.
  Subject : Algorithms for the Haplotyping Problem
  Environment : C++ on PC.

From July 2002 to September 2002 :
  Student(s) : Sofiène Omri
  Level : Master in Genetics
  Location : Department of Biology, Faculty of Sciences of Tunis, and
                         Pasteur Institute of Tunis.
  Subject : Conception of a Biological Data Base :
                    Macrophage Knowledge Database (MKD)
  Environment : MySQL, HTML, C++ on PC.

From July 2002 to January 2003 :
  Student(s) : Jihène Drira
  Level : 6th level in Computer Networks and Telecommunication Engineering
  Location : Computer Science Department,
                      National Institute of Applied Sciences and Technologies.
  Subject : Encoding of Biological Data within a Data Mining Perspective
  Environment : C++ on PC.

From July 2002 to March 2003 :
  Student(s) : Sameh Ben Nefissa
  Level : 6th level in Computer Networks and Telecommunication Engineering
  Location : Computer Science Department,
                      National Institute of Applied Sciences and Technologies.
  Subject : Extraction of Association Rules for the Formal Analysis of Concepts
  Environment : C++ on PC.

From July 2002 to March 2003 :
  Student(s) : Salwa Mbarek
  Level : 6th level in Computer Networks and Telecommunication Engineering
  Location : Computer Science Department,
                       National Institute of Applied Sciences and Technologies.
  Subject : Conception and Achievement of Decision Trees
  Environment : C++ on PC.

From November 2001 to Present :
  Student : Fawzi Mhamdi
  Level : Ph.D. in Computer Science
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : Biological Knowledge Discovery and Data Mining
  Environment : C++ on SUN SPARCstation.

From January 2001 to June 2001 :
  Student(s) : Nawfel El Euchy, Ghassen Harrath
  Level : 5th level in Computer Engineering
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : Classification of Biological Sequences
  Environment : C++ on SUN SPARCstation.

From October 1997 to October 1998 :
  Student(s) : Safa Kaâbi
  Level : Master in Computer Science
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : DNA Sequence Assembly
  Environment : C on SUN SPARCstation.

From January 1997 to June 1997 :
  Student(s) : Rachid Ennasri
  Level : 6th level in Computer Engineering
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : Experimentation  of  DNA Sequence Assembly Algorithms
  Environment : C on SUN SPARCstation.

From January 1996 to June 1996 :
  Student(s) : Monia Guélmami, Hédia Kochkar
  Level : 5th level in Computer Engineering
  Location : Computer Science Department, Faculty of Sciences of Tunis
  Subject : Construction  of a Common Subsequence to a Family of Strings
  Environment : C on PC.





Sessions Organization

3. Session : Algorithms in Molecular Biology
   Conférence : 4th International Conference on Mathematics and Computers in Biology and
                         Chemistry, MCBC'04 (Miami, Florida, U.S.A.) : (February 2004).

2. Session : Biological  Knowledge Discovery and Data Mining.
   Conference : Conference on Computational Biology and Genome Informatics, 
                          CBGI'2003 (Cary, North Carolina, U.S.A.) : (September 2003).

1. Session : Data Mining and Knowledge Discovery in Biological  Databases.
   Conference : The 2001 International Conference on Mathematics and Engineering
                             Techniques in Medicine and Biological Sciences, METMBS'2001
                             (Las Vegas, Nevada, U.S.A.) : (June 2001).








Chairman of Sessions

3. Session : Biological  Knowledge Discovery and Data Mining.
   Conference : Conference on Computational Biology and Genome Informatics, 
                          CBGI'2003 (Cary, North Carolina, U.S.A.) : (September 2003).

2. Session : Data Mining and Knowledge Discovery in Biological  Databases.
   Conference : The 2001 International Conference on Mathematics and Engineering
                         Techniques in Medicine and Biological Sciences, METMBS'2001
                         (Las Vegas, Nevada, U.S.A.) : (June 2001).

1. Session : SCI in Biology and Medicine I.
   Conference : 3rd World Conference on Systematics, Cybernetics and Informatics, SCI'99
                             (Orlando, Florida, U.S.A.) : (August 1999).







Member of Program Committees

4. Conference : First International Conference on Computing and Information Sciences,
                           ICCIS'04 (Doha, Qatar) : (March 2004)

3. Conference : Atlantic Symposium on Computational Biology and Genome Information
                              Systems & Technology, CBGI'2003 (Cary, North Carolina, U.S.A.) :
                          (September 2003).

2. Conference : The 2001 International Conference on Mathematics and Engineering
                              Techniques in Medicine and Biological Sciences, METMBS'2001
                              (Las Vegas, Nevada, U.S.A.) : (June 2001).

1. Conference : Atlantic Symposium on Computational Biology and Genome Information
                              Systems & Technology, CBGI'2001 (Durham, North Carolina, U.S.A.) :
                           (March 2001).






List of Scientific Publications


Habilitation Dissertation

2003

    1. [Elloumi 03] : M. Elloumi, Algorithms of Analysis of Strings Coding
        Biological Macromolecules, Habilitation Dissertation in Computer Science,
        University of Manouba, Tunis, Tunisia : (October 2003).


Ph.D Dissertation

1994

    1. [Elloumi 94] : M. Elloumi, Analysis of Strings Coding Biological Macromolecules,
        Ph.D Dissertation in Computer Science, University of Aix-Marseilles III, France :
        (June 1994).


International Journals

2004

    6. [Elloumi and Maddouri 04] :  M. Elloumi, M. Maddouri, A New Data Mining 
        Approach to Classify Biological Macromolecules, Knowledge and Information
        Systems, An International Journal, Vol. 6, N°3, Springer-Verlag London Ltd,
        London, United Kingdom (Publisher) : (May 2004).

    5. [Maddouri and Elloumi 04] : M. Maddouri, M. Elloumi, Encoding of Biological
        Macromolecules, Journal of Computer Science and Technology, Vol. 19, N°1,
        Special Issue on Bioinformatics, Chinese Academy of Sciences, Beijing, China
        (Publisher) : (January 2004).

2002

    4. [Maddouri and Elloumi 02] : M. Maddouri, M. Elloumi, A Data Mining Approach               based on Machine Learning Techniques to Classify Biological Sequences,
         Knowledge Based Systems Journal, Elsevier Publishing Co., North-Holland (Publisher) :
         (January 2002).

2001

   3. [Elloumi 01b] : M. Elloumi, Algorithms for the Prediction of Secondary Structures of
       RNA Macromolecules, Journal of Computational Technologies, Siberian Branch,
       Russian Academy of Sciences, Novosibirsk, Russia (Publisher) : (October 2001).

2000

    2. [Elloumi 00d] : M. Elloumi, Algorithms for the Shortest Exact Common Superstring
        Problem, South African Computer Journal, N°26, South African Computer Society,
           Johannesbourg, South Africa (Publisher) : (November 2000), p22-26.

1998

   1. [Elloumi 98b] : M. Elloumi, Comparison of Strings Belonging to the Same Family,
       Information Sciences, An International Journal, Vol. 111, Issue 1-4, Elsevier Publishing
       Co., Amsterdam, North-Holland (Publisher) : (November 1998), p49-63.


International Conferences

2003

   11. [Elloumi and Maddouri 03] : M. Elloumi, M. Maddouri, A Data Mining Approach
          based on Vote Strategies to Classify Biological Sequences, in Proc. Workshop on
          Discrete Mathematics and Data Mining, DM&DM'03, Third SIAM International
          Conference on Data Mining (San Francisco, California, U.S.A.) : (May 2003).

2001

   10. [Maddouri and Elloumi 01] : M. Maddouri, M. Elloumi, Classification of Biological            Sequences by using a Data Mining Approach, in Proc. of The 2001 International
         Conference on Mathematics and Engineering Techniques in Medicine and Biological
         Sciences, METMBS'01 (Las Vegas, Nevada, U.S.A.) : (June 2001).

   9. [Elloumi 01a] : M. Elloumi, An Algorithm for the Approximate String-Matching
       Problem, in Proc. of Atlantic Symposium on Computational Biology, Genome 
       Information Systems & Technology, CBGI'01, (Durham, North Carolina, U.S.A.) :
       (March 2001).

2000

   8. [Elloumi 00c] : M. Elloumi, Algorithms for the Shortest Approximate Common
       Superstring Problem, in Proc. of The 1st Society for Industrial and Applied Mathematics         Conference on Computer Science and Engineering, (SIAM-CS&I'00),
       (Washington D.C., U.S.A.) : (September 2000).

  7. [Elloumi 00b] : M. Elloumi, Algorithms for the DNA Sequence Assembly Problem, in
      Proc. of 4th World Conference on Systematics, Cybernetics and Informatics, and 6th
      International Conference on Information Systems Analysis and Synthesis,
      SCI2000/ISAS2000, Session : SCI in Biology and Medicine (Orlando, Florida, U.S.A.),
       International Institute of Informatics and Systemics, Illinois, U.S.A. (Eds.) : (July 2000).

  6. [Elloumi 00a] : M. Elloumi, DNA Sequence Assembly Algorithms Based on Clustering
      Approaches, in Proc. of The 2000 International Conference on Mathematics and
       Engineering Techniques in Medicine and Biological Sciences, METMBS'00, Vol. II
          (Las Vegas, Nevada, U.S.A.) : (June 2000), p717-723.

  5. [Elloumi and Maddouri 00] : M. Elloumi, M. Maddouri, Discrimination Between Two
     Families of Strings: Application to Classification of Primary Structures of Biological
     Macromolecules, in Proc. of 2nd International Workshop on Biological Informatics,
     BIW'2000, Vol. II (Atlantic City, New Jersey, U.S.A.) : (February 2000), p819-822.

  4. [Barouni and Elloumi 00] : A. Barouni, M. Elloumi, An Algorithm for Drawing
      Normal Representation of RNA Secondary Structures, in Proc. of 2nd International
      Workshop on Biological Informatics, BIW'2000 Vol. II
      (Atlantic City, New Jersey, U.S.A.) : (February 2000), p766-769.

1999

   3. [Elloumi and Kaâbi 99] : M. Elloumi, S. Kaâbi, Exact and Approxtimation
       Algorithms for the DNA Sequence Assembly Problem, in Proc. of 3rd World
      Conference on Systematics, Cybernetics and Informatics, and 5th International
      Conference on  Information Systems Analysis and Synthesis, SCI'99/ISAS'99, Session :
      SCI in Biology and Medicine, Vol. 8 (Orlando, Florida, U.S.A.), International Institute of
      Informatics and Systemics, Illinois, U.S.A. (Eds.) : (July 1999), p152-157.

1998

   2. [Elloumi and Kaâbi 98] : M. Elloumi, S. Kaâbi, DNA Sequence Assembly Algorithms,
       in Proc. of 2nd Workshop on Intelligent Control Systems, IC'98
       (North Carolina, U.S.A.) : (October 1998).

   1. [Elloumi 98a] : M. Elloumi, New Algorithms to Predict Secondary Structures of RNA
       Macromolecules, in Proc. of 11th International Conference on Industrial and Engineering
       Applications of Artificial Intelligence and Expert Systems, IEA/AIE'98, Vol. 1
       (Benicassim, Castellon, Spain), Springer Lecture Notes in Artificial Intelligence,
       Springer-Verlag, Berlin (Eds.) : (June 1998), p864-875.


You are visitor N°
                                                  



This page was last updated on: April 19, 2007